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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874209.1_cds_XP_016435407.1_31370
CDS Infomation

[gene=LOC107761676] [db_xref=GeneID:107761676] [protein=probable LRR receptor-like serine/threonine-protein kinase At4g20940] [protein_id=XP_016435407.1] [location=join(84024..84930,85626..86540,86618..87136,87339..87928)] [gbkey=CDS]
Sequence

ATGCAGTCTGCCATTTGTTTGGTGCTGCTATTTTTAGTTGAGTTAGTTAAAGGAAGCTTA
GATTTGGATGTTCTTTTGGAGCTTAAGAAGGGTGTTCTTAAAGACCCTCTAGGGAAAGTC
CTTTCTTCATGGGATTCTAAGTCATTAGGACCAAATGGGTGCCCCAAAAATTGGTATGGT
ATCAGTTGTAGTGATGGCCATGTCACTTCAATTGAACTAAATGATGTTGGTCTAGTTGGA
GCTTTGGATTTTGCAGATATTGCTGGCCTAAAAATGCTGCAGAATTTGTCTGTTGCAAAC
AACCAATTGAGTGGGAAAATTACTAAGGAAGTTGGTTTGATTGTTTCATTGGAATACTTG
GATCTTTCCAAGAACTTGTTTAGTGGCTCTATACCCTCTGAGCTGACTAGTTTAAAGAAC
TTGGTATCTCTTAATCTTTCTTTAAACAGCCTCGACGGAATGGTTCCGTCTGGTTTTGCT
AGTCTTGAGAAATTGAAGTATCTGGATTTGCATTCTAATGCCTTGTCAAGTGATATTATG
CTGCTACTGGCCTCATTGGGTGATGTAGAGTATGTCGATATCAGTAGCAACAAGTTTATT
GGATCACTAGACCTGCCAGTAGGAAATTCGAGCTTCGTCTCGTCAATTCAGTATTTGAAC
ATTAGTCATAATAACCTGGCCGGGGAGCTCTTTCCTCATGATGGAATGCCATACTTTGAT
AGCTTAGAGGTGTTTGATGCAAGTGACAATCAGCTTACTGGTATTATTCCGTCCTTCAAT
TTTGTAGTTTCTCTTCGAATTCTTAGGCTTGGGAACAATCAGTTGTCTGGATCAGTACCC
GAAGCTCTTTTGGAGGAAAGCTCAATGATCTTATCAGAATTGGACCTGAGCCAGAATCAG
CTTGCAGGTCCCATCGCAAGTATAAGTGCCGTGAATCTCAAGCTTCTAAATTTATCCTAC
AACCAGCTGTCAGGCCCCTTGCCTGTAAAGGTTGGGCGTTGTGCCATCATAGACCTGAGC
AACAATCTGCTAACTGGAAAAGTTTCCCGGATCCAAGGTTGGGGAAATTACGCTGAAGTT
ATTGTGTTAAGCTCAAATACATTGACGGGAACCTTTCCCAACCAAACTTCCCAGTTCTTG
AGGCTTACTTCGTTAAAGATTTCAAACAACTCACTTGAAGGTGTGTTACCAGCTATTTTA
GGTACATACCCCGAACTTAAAATGATTGATCTTAGCATTAACCAACTTAGTGGTACTCTC
CTTCCCAGCCTTTTCAACTCTAGCAGATTGACTGATATTAACGTGTCTTTCAACAAATTT
ACCGGCAGTATACCTATAGTGGCATTCAAGTCAGAGAATTTAAGCTTGATTTCTCTAGAT
CTTTCACATAATGAATTATCTGGCCTTTTGCCTCCGGGGCTGTGCAAGTTCCCGGACATG
GTATATCTGGATATCTCTAATAATGATTTTGAAGGTGGCCTTCCTAGTGACCTCTCTGAC
AAATTGGAATATTTCAATGTGTCTAATAACAATCTTTCTGGAACGGTTCCGAAAAATTTA
TGGAGGTTTCCTATCTCCTCGTTCCAACCGGGGAATCCCTTGCTTGTACTGCCAAAGCAC
GTCGAAGCTCCGTCAGAAGGAGATTCCACTTTGAACTTGAGAAGTCACGGCCCTCGCATG
AAATCCACCATCAGGGCTGCCCTTATTGCTGGTCTGGTCTGTAGTGTATCTGTCATAGCT
TTGTTGACATTAGTAATCTACCGCAAGGCTCATCAACGAGATGGTGGGAAGGATGATACC
AAAGTAACTAAGGGTAAAAAAGGTTTGTCTTTATCCGATATAAAAAACGGACATGATACA
AGAGATCAAGGGATGCCAGTGTCAACAGTCCAAAATGAGCCGATATCTTCTTCTATATCT
GTTATGTCATCAGCCAATCTATCGCCTTCTAAGGTTCAAGATCAATCCAAAAGCCCTAAC
TCTCTCAGGGTTTCTTCTCCTGATAAACTGGCTGGAGATTTGCATCTATTAGATAACTCC
TTGAAGTTCACTGCAGAAGAATTATCATGTGCTCCTGCAGAAGCTGTAGGCAGAAGTTGT
CACGGAACATTGTATAAAGCTATGCTTGGTTCAGGCCAAGAATTTGCTGTCAAATGGCTT
AAGGAAGGGATAGTGAAAGGCAAAAAGGAATTTGCTAGAGAAGCTAAGAAACTGGGGAGT
ATTAGGCATCCAAATTTAGTTTCTCTTCAGGGTTACTACTGGGGTCCCAAAGAGCACGAG
AGGCTTCTCATATCGAATTACACCAGTGCACCATGTTTAGCTCTCTATCTTCTTGGTAAA
GATGCAGACTCCTATAAGCTACAACCGTTGTCTTTTGAGGAGCGGCTCGAGGTCTCTGTA
GATGTAGCTCGTTGTCTAAACTACCTTCACCATGAAAGTGCCATACCTCATGGCAACCTG
AAATCCACAAATGTACTAATAGAAACGCCTAACGTGAATGCCCTCCTTACAGATTACAGT
CTTCATCGGTTAATGACATCAGCTGGAACAGCAGAACAAGTACTAAATGCCGGTGCACTT
GGTTATCGGCCTCCTGAATTTGCAAGTACAAGTAAACCTTGCCCGTCGTTGAAAAGTGAT
GTTTATGCGTTCGGGGTTATCTTGTTGGAACTGTTGACTGGAAGAAGTTCTGCAGAAATT
GTTCCTGGAAATTCAGAAGTGCTGGATTTAACAGAATGGGTGAGATTGTTGGCCATCAAA
AACCGCTCAATCGAGTGTTTTGATCCATTTTTATTGGGAAAAGAGAGCAACGAAGGCGTG
CATGCGATTCTTGATAGCATGCTTCAGGTTGCTCTCAAGTGTATTTTGCCAGCTGATGAA
AGGCCTGATATGAGAATGGTTTTTGAGGAACTTTGTTCAATAGTACAATAA

Peptide Sequence

PEP ID

XP_016435407.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Nicotiana tabacum]
Sequence

MQSAICLVLLFLVELVKGSLDLDVLLELKKGVLKDPLGKVLSSWDSKSLGPNGCPKNWYG
ISCSDGHVTSIELNDVGLVGALDFADIAGLKMLQNLSVANNQLSGKITKEVGLIVSLEYL
DLSKNLFSGSIPSELTSLKNLVSLNLSLNSLDGMVPSGFASLEKLKYLDLHSNALSSDIM
LLLASLGDVEYVDISSNKFIGSLDLPVGNSSFVSSIQYLNISHNNLAGELFPHDGMPYFD
SLEVFDASDNQLTGIIPSFNFVVSLRILRLGNNQLSGSVPEALLEESSMILSELDLSQNQ
LAGPIASISAVNLKLLNLSYNQLSGPLPVKVGRCAIIDLSNNLLTGKVSRIQGWGNYAEV
IVLSSNTLTGTFPNQTSQFLRLTSLKISNNSLEGVLPAILGTYPELKMIDLSINQLSGTL
LPSLFNSSRLTDINVSFNKFTGSIPIVAFKSENLSLISLDLSHNELSGLLPPGLCKFPDM
VYLDISNNDFEGGLPSDLSDKLEYFNVSNNNLSGTVPKNLWRFPISSFQPGNPLLVLPKH
VEAPSEGDSTLNLRSHGPRMKSTIRAALIAGLVCSVSVIALLTLVIYRKAHQRDGGKDDT
KVTKGKKGLSLSDIKNGHDTRDQGMPVSTVQNEPISSSISVMSSANLSPSKVQDQSKSPN
SLRVSSPDKLAGDLHLLDNSLKFTAEELSCAPAEAVGRSCHGTLYKAMLGSGQEFAVKWL
KEGIVKGKKEFAREAKKLGSIRHPNLVSLQGYYWGPKEHERLLISNYTSAPCLALYLLGK
DADSYKLQPLSFEERLEVSVDVARCLNYLHHESAIPHGNLKSTNVLIETPNVNALLTDYS
LHRLMTSAGTAEQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGVILLELLTGRSSAEI
VPGNSEVLDLTEWVRLLAIKNRSIECFDPFLLGKESNEGVHAILDSMLQVALKCILPADE
RPDMRMVFEELCSIVQ

Transcript Sequence

Gene sequence data has not been registered.